Detailed information of SNP:
|
SNP ID:
sf1124764148(Gbrowse)
Chromosome: chr11 Position: 24764148 |
Major allele:
C
Minor allele: G Reference allele: C |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of C(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1413 | 92.36% | 7.64% |
| All Indica | 796 | 91.33% | 8.67% |
| All Japonica | 495 | 94.34% | 5.66% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 375 | 91.47% | 8.53% |
| Indica II | 213 | 98.59% | 1.41% |
| Indica Intermediate | 208 | 83.65% | 16.35% |
| Temperate Japonica | 335 | 99.70% | 0.30% |
| Tropical Japonica | 92 | 73.91% | 26.09% |
| Japonica Intermediate | 68 | 95.59% | 4.41% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 73.17% | 26.83% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf1124764148 | C->G | INTERGENIC | None |