Detailed information of SNP:



SNP ID: sf1124955619(Gbrowse)

Chromosome: chr11

Position: 24955619
Major allele: G

Minor allele: T

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of T(minor allele)
All1419 90.27% 9.73%
All Indica799 94.62% 5.38%
All Japonica497 88.73% 11.27%
Aus67 65.67% 34.33%
Indica I375 97.07% 2.93%
Indica II213 88.26% 11.74%
Indica Intermediate211 96.68% 3.32%
Temperate Japonica335 97.91% 2.09%
Tropical Japonica94 55.32% 44.68%
Japonica Intermediate68 89.71% 10.29%
Group VI/Aromatic14 0.00% 100.00%
Intermediate42 95.24% 4.76%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf1124955619 G->T INTERGENIC None