Detailed information of SNP:
|
SNP ID:
sf1126066881(Gbrowse)
Chromosome: chr11 Position: 26066881 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1418 | 51.20% | 48.80% |
| All Indica | 798 | 47.74% | 52.26% |
| All Japonica | 497 | 61.37% | 38.63% |
| Aus | 67 | 31.34% | 68.66% |
| Indica I | 375 | 51.20% | 48.80% |
| Indica II | 212 | 26.42% | 73.58% |
| Indica Intermediate | 211 | 63.03% | 36.97% |
| Temperate Japonica | 335 | 78.21% | 21.79% |
| Tropical Japonica | 94 | 27.66% | 72.34% |
| Japonica Intermediate | 68 | 25.00% | 75.00% |
| Group VI/Aromatic | 14 | 0.00% | 100.00% |
| Intermediate | 42 | 45.24% | 54.76% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf1126066881 | G->A | INTERGENIC | None |