Detailed information of SNP:
|
SNP ID:
sf1126097194(Gbrowse)
Chromosome: chr11 Position: 26097194 |
Major allele:
G
Minor allele: A Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1416 | 58.55% | 41.45% |
| All Indica | 797 | 63.11% | 36.89% |
| All Japonica | 497 | 43.26% | 56.74% |
| Aus | 66 | 86.36% | 13.64% |
| Indica I | 374 | 54.28% | 45.72% |
| Indica II | 213 | 85.92% | 14.08% |
| Indica Intermediate | 210 | 55.71% | 44.29% |
| Temperate Japonica | 335 | 27.16% | 72.84% |
| Tropical Japonica | 94 | 75.53% | 24.47% |
| Japonica Intermediate | 68 | 77.94% | 22.06% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 95.24% | 4.76% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf1126097194 | A->G | INTERGENIC | None |