Detailed information of SNP:
|
SNP ID:
sf1126302033(Gbrowse)
Chromosome: chr11 Position: 26302033 |
Major allele:
A
Minor allele: G Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of A(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1394 | 97.49% | 2.51% |
| All Indica | 779 | 96.02% | 3.98% |
| All Japonica | 494 | 99.39% | 0.61% |
| Aus | 67 | 98.51% | 1.49% |
| Indica I | 369 | 97.56% | 2.44% |
| Indica II | 203 | 94.09% | 5.91% |
| Indica Intermediate | 207 | 95.17% | 4.83% |
| Temperate Japonica | 334 | 99.40% | 0.60% |
| Tropical Japonica | 93 | 98.92% | 1.08% |
| Japonica Intermediate | 67 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 40 | 100.00% | 0.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf1126302033 | A->G | INTERGENIC | None |