Detailed information of SNP:



SNP ID: sf1127257411(Gbrowse)

Chromosome: chr11

Position: 27257411
Major allele: C

Minor allele: G

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of G(minor allele)
All1418 83.64% 16.36%
All Indica799 87.11% 12.89%
All Japonica497 77.46% 22.54%
Aus66 89.39% 10.61%
Indica I375 92.00% 8.00%
Indica II213 88.26% 11.74%
Indica Intermediate211 77.25% 22.75%
Temperate Japonica335 78.81% 21.19%
Tropical Japonica94 72.34% 27.66%
Japonica Intermediate68 77.94% 22.06%
Group VI/Aromatic14 92.86% 7.14%
Intermediate42 78.57% 21.43%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf1127257411 G->C INTERGENIC None