Detailed information of SNP:
|
SNP ID:
sf1127364167(Gbrowse)
Chromosome: chr11 Position: 27364167 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1415 | 82.19% | 17.81% |
| All Indica | 795 | 71.45% | 28.55% |
| All Japonica | 497 | 96.98% | 3.02% |
| Aus | 67 | 94.03% | 5.97% |
| Indica I | 374 | 77.01% | 22.99% |
| Indica II | 210 | 62.38% | 37.62% |
| Indica Intermediate | 211 | 70.62% | 29.38% |
| Temperate Japonica | 335 | 96.42% | 3.58% |
| Tropical Japonica | 94 | 97.87% | 2.13% |
| Japonica Intermediate | 68 | 98.53% | 1.47% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 85.71% | 14.29% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf1127364167 | G->A | INTERGENIC | None |