Detailed information of SNP:



SNP ID: sf1127491975(Gbrowse)

Chromosome: chr11

Position: 27491975
Major allele: C

Minor allele: T

Reference allele: C

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of T(minor allele)
All1415 97.31% 2.69%
All Indica796 95.35% 4.65%
All Japonica496 99.80% 0.20%
Aus67 100.00% 0.00%
Indica I373 95.98% 4.02%
Indica II213 95.31% 4.69%
Indica Intermediate210 94.29% 5.71%
Temperate Japonica334 99.70% 0.30%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 100.00% 0.00%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 100.00% 0.00%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf1127491975 C->T INTERGENIC None