Detailed information of SNP:



SNP ID: sf1127981337(Gbrowse)

Chromosome: chr11

Position: 27981337
Major allele: G

Minor allele: A

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1419 95.63% 4.37%
All Indica799 99.75% 0.25%
All Japonica497 92.56% 7.44%
Aus67 71.64% 28.36%
Indica I375 100.00% 0.00%
Indica II213 99.53% 0.47%
Indica Intermediate211 99.53% 0.47%
Temperate Japonica335 97.61% 2.39%
Tropical Japonica94 75.53% 24.47%
Japonica Intermediate68 91.18% 8.82%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 90.48% 9.52%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf1127981337 G->A INTERGENIC None