Detailed information of SNP:
SNP ID:
sf1127981337(Gbrowse)
Chromosome: chr11 Position: 27981337 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
---|---|---|---|
All | 1419 | 95.63% | 4.37% |
All Indica | 799 | 99.75% | 0.25% |
All Japonica | 497 | 92.56% | 7.44% |
Aus | 67 | 71.64% | 28.36% |
Indica I | 375 | 100.00% | 0.00% |
Indica II | 213 | 99.53% | 0.47% |
Indica Intermediate | 211 | 99.53% | 0.47% |
Temperate Japonica | 335 | 97.61% | 2.39% |
Tropical Japonica | 94 | 75.53% | 24.47% |
Japonica Intermediate | 68 | 91.18% | 8.82% |
Group VI/Aromatic | 14 | 100.00% | 0.00% |
Intermediate | 42 | 90.48% | 9.52% |
Allele Var Effect:
SNP ID | Var | Gene | Effect/Location |
---|---|---|---|
sf1127981337 | G->A | INTERGENIC | None |