Detailed information of SNP:



SNP ID: sf1128246199(Gbrowse)

Chromosome: chr11

Position: 28246199
Major allele: A

Minor allele: G

Reference allele: A

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of A(major allele)Frequency of G(minor allele)
All1400 89.93% 10.07%
All Indica797 99.37% 0.63%
All Japonica480 73.12% 26.88%
Aus67 100.00% 0.00%
Indica I375 100.00% 0.00%
Indica II213 99.53% 0.47%
Indica Intermediate209 98.09% 1.91%
Temperate Japonica322 83.23% 16.77%
Tropical Japonica91 37.36% 62.64%
Japonica Intermediate67 73.13% 26.87%
Group VI/Aromatic14 92.86% 7.14%
Intermediate42 85.71% 14.29%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf1128246199 A->G INTERGENIC None