Detailed information of SNP:
|
SNP ID:
sf1128305351(Gbrowse)
Chromosome: chr11 Position: 28305351 |
Major allele:
G
Minor allele: T Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of T(minor allele) |
|---|---|---|---|
| All | 1419 | 93.16% | 6.84% |
| All Indica | 799 | 93.62% | 6.38% |
| All Japonica | 497 | 93.36% | 6.64% |
| Aus | 67 | 80.60% | 19.40% |
| Indica I | 375 | 91.20% | 8.80% |
| Indica II | 213 | 98.12% | 1.88% |
| Indica Intermediate | 211 | 93.36% | 6.64% |
| Temperate Japonica | 335 | 90.75% | 9.25% |
| Tropical Japonica | 94 | 98.94% | 1.06% |
| Japonica Intermediate | 68 | 98.53% | 1.47% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 100.00% | 0.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf1128305351 | G->T | INTERGENIC | None |