Detailed information of SNP:
|
SNP ID:
sf1128312183(Gbrowse)
Chromosome: chr11 Position: 28312183 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1418 | 94.01% | 5.99% |
| All Indica | 799 | 93.49% | 6.51% |
| All Japonica | 496 | 93.75% | 6.25% |
| Aus | 67 | 97.01% | 2.99% |
| Indica I | 375 | 91.20% | 8.80% |
| Indica II | 213 | 98.12% | 1.88% |
| Indica Intermediate | 211 | 92.89% | 7.11% |
| Temperate Japonica | 334 | 91.32% | 8.68% |
| Tropical Japonica | 94 | 98.94% | 1.06% |
| Japonica Intermediate | 68 | 98.53% | 1.47% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 100.00% | 0.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf1128312183 | G->A | INTERGENIC | None |