Detailed information of SNP:
|
SNP ID:
sf1128340650(Gbrowse)
Chromosome: chr11 Position: 28340650 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1418 | 88.29% | 11.71% |
| All Indica | 799 | 93.37% | 6.63% |
| All Japonica | 497 | 81.29% | 18.71% |
| Aus | 67 | 88.06% | 11.94% |
| Indica I | 375 | 93.07% | 6.93% |
| Indica II | 213 | 99.06% | 0.94% |
| Indica Intermediate | 211 | 88.15% | 11.85% |
| Temperate Japonica | 335 | 81.49% | 18.51% |
| Tropical Japonica | 94 | 79.79% | 20.21% |
| Japonica Intermediate | 68 | 82.35% | 17.65% |
| Group VI/Aromatic | 14 | 28.57% | 71.43% |
| Intermediate | 41 | 95.12% | 4.88% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf1128340650 | G->A | INTERGENIC | None |