Detailed information of SNP:



SNP ID: sf1201303030(Gbrowse)

Chromosome: chr12

Position: 1303030
Major allele: G

Minor allele: A

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1416 98.52% 1.48%
All Indica798 99.50% 0.50%
All Japonica496 96.57% 3.43%
Aus67 100.00% 0.00%
Indica I375 99.20% 0.80%
Indica II212 100.00% 0.00%
Indica Intermediate211 99.53% 0.47%
Temperate Japonica334 95.51% 4.49%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 97.06% 2.94%
Group VI/Aromatic14 100.00% 0.00%
Intermediate41 100.00% 0.00%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf1201303030 G->A INTERGENIC None