Detailed information of SNP:



SNP ID: sf1201875122(Gbrowse)

Chromosome: chr12

Position: 1875122
Major allele: A

Minor allele: G

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of A(major allele)Frequency of G(minor allele)
All1415 55.12% 44.88%
All Indica796 94.85% 5.15%
All Japonica497 1.21% 98.79%
Aus67 5.97% 94.03%
Indica I374 95.99% 4.01%
Indica II211 94.31% 5.69%
Indica Intermediate211 93.36% 6.64%
Temperate Japonica335 1.19% 98.81%
Tropical Japonica94 2.13% 97.87%
Japonica Intermediate68 0.00% 100.00%
Group VI/Aromatic14 0.00% 100.00%
Intermediate41 36.59% 63.41%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf1201875122 G->A INTERGENIC None