Detailed information of SNP:



SNP ID: sf1204670429(Gbrowse)

Chromosome: chr12

Position: 4670429
Major allele: G

Minor allele: A

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1414 94.55% 5.45%
All Indica799 100.00% 0.00%
All Japonica494 91.70% 8.30%
Aus65 52.31% 47.69%
Indica I375 100.00% 0.00%
Indica II213 100.00% 0.00%
Indica Intermediate211 100.00% 0.00%
Temperate Japonica334 95.81% 4.19%
Tropical Japonica94 94.68% 5.32%
Japonica Intermediate66 66.67% 33.33%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 88.10% 11.90%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf1204670429 G->A INTERGENIC None