Detailed information of SNP:
|
SNP ID:
sf1206418795(Gbrowse)
Chromosome: chr12 Position: 6418795 |
Major allele:
G
Minor allele: A Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1416 | 93.86% | 6.14% |
| All Indica | 798 | 97.37% | 2.63% |
| All Japonica | 496 | 88.31% | 11.69% |
| Aus | 66 | 87.88% | 12.12% |
| Indica I | 375 | 98.67% | 1.33% |
| Indica II | 212 | 94.81% | 5.19% |
| Indica Intermediate | 211 | 97.63% | 2.37% |
| Temperate Japonica | 334 | 86.83% | 13.17% |
| Tropical Japonica | 94 | 97.87% | 2.13% |
| Japonica Intermediate | 68 | 82.35% | 17.65% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 100.00% | 0.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf1206418795 | A->G | INTERGENIC | None |