Detailed information of SNP:
|
SNP ID:
sf1207299015(Gbrowse)
Chromosome: chr12 Position: 7299015 |
Major allele:
G
Minor allele: A Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1360 | 97.87% | 2.13% |
| All Indica | 799 | 100.00% | 0.00% |
| All Japonica | 440 | 93.41% | 6.59% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 375 | 100.00% | 0.00% |
| Indica II | 213 | 100.00% | 0.00% |
| Indica Intermediate | 211 | 100.00% | 0.00% |
| Temperate Japonica | 291 | 91.41% | 8.59% |
| Tropical Japonica | 87 | 100.00% | 0.00% |
| Japonica Intermediate | 62 | 93.55% | 6.45% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 40 | 100.00% | 0.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf1207299015 | A->G | INTERGENIC | None |