Detailed information of SNP:
|
SNP ID:
sf1207426021(Gbrowse)
Chromosome: chr12 Position: 7426021 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1332 | 98.05% | 1.95% |
| All Indica | 797 | 100.00% | 0.00% |
| All Japonica | 414 | 93.96% | 6.04% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 374 | 100.00% | 0.00% |
| Indica II | 213 | 100.00% | 0.00% |
| Indica Intermediate | 210 | 100.00% | 0.00% |
| Temperate Japonica | 287 | 91.99% | 8.01% |
| Tropical Japonica | 73 | 100.00% | 0.00% |
| Japonica Intermediate | 54 | 96.30% | 3.70% |
| Group VI/Aromatic | 14 | 92.86% | 7.14% |
| Intermediate | 40 | 100.00% | 0.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf1207426021 | G->A | INTERGENIC | None |