Detailed information of SNP:
SNP ID:
sf1207814166(Gbrowse)
Chromosome: chr12 Position: 7814166 |
Major allele:
G
Minor allele: A Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
---|---|---|---|
All | 1418 | 61.07% | 38.93% |
All Indica | 799 | 94.99% | 5.01% |
All Japonica | 497 | 2.41% | 97.59% |
Aus | 66 | 95.45% | 4.55% |
Indica I | 375 | 95.73% | 4.27% |
Indica II | 213 | 95.77% | 4.23% |
Indica Intermediate | 211 | 92.89% | 7.11% |
Temperate Japonica | 335 | 2.09% | 97.91% |
Tropical Japonica | 94 | 2.13% | 97.87% |
Japonica Intermediate | 68 | 4.41% | 95.59% |
Group VI/Aromatic | 14 | 92.86% | 7.14% |
Intermediate | 42 | 45.24% | 54.76% |
Allele Var Effect:
SNP ID | Var | Gene | Effect/Location |
---|---|---|---|
sf1207814166 | A->G | INTERGENIC | None |