Detailed information of SNP:



SNP ID: sf1207823910(Gbrowse)

Chromosome: chr12

Position: 7823910
Major allele: A

Minor allele: G

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of A(major allele)Frequency of G(minor allele)
All1418 60.93% 39.07%
All Indica798 94.74% 5.26%
All Japonica497 2.41% 97.59%
Aus67 97.01% 2.99%
Indica I375 96.27% 3.73%
Indica II212 95.28% 4.72%
Indica Intermediate211 91.47% 8.53%
Temperate Japonica335 2.09% 97.91%
Tropical Japonica94 2.13% 97.87%
Japonica Intermediate68 4.41% 95.59%
Group VI/Aromatic14 92.86% 7.14%
Intermediate42 42.86% 57.14%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf1207823910 G->A INTERGENIC None