Detailed information of SNP:



SNP ID: sf1208317914(Gbrowse)

Chromosome: chr12

Position: 8317914
Major allele: G

Minor allele: A

Reference allele: A

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1410 76.74% 23.26%
All Indica792 89.27% 10.73%
All Japonica497 53.32% 46.68%
Aus67 97.01% 2.99%
Indica I371 88.68% 11.32%
Indica II211 89.57% 10.43%
Indica Intermediate210 90.00% 10.00%
Temperate Japonica335 36.72% 63.28%
Tropical Japonica94 92.55% 7.45%
Japonica Intermediate68 80.88% 19.12%
Group VI/Aromatic12 83.33% 16.67%
Intermediate42 83.33% 16.67%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf1208317914 A->G INTERGENIC None