Detailed information of SNP:



SNP ID: sf1209267853(Gbrowse)

Chromosome: chr12

Position: 9267853
Major allele: G

Minor allele: A

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1401 95.07% 4.93%
All Indica799 99.62% 0.38%
All Japonica479 86.43% 13.57%
Aus67 100.00% 0.00%
Indica I375 99.73% 0.27%
Indica II213 99.06% 0.94%
Indica Intermediate211 100.00% 0.00%
Temperate Japonica327 81.65% 18.35%
Tropical Japonica91 100.00% 0.00%
Japonica Intermediate61 91.80% 8.20%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 97.62% 2.38%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf1209267853 G->A INTERGENIC None