Detailed information of SNP:



SNP ID: sf1210568913(Gbrowse)

Chromosome: chr12

Position: 10568913
Major allele: C

Minor allele: T

Reference allele: T

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of T(minor allele)
All1419 71.88% 28.12%
All Indica799 95.37% 4.63%
All Japonica497 29.98% 70.02%
Aus67 97.01% 2.99%
Indica I375 97.33% 2.67%
Indica II213 90.61% 9.39%
Indica Intermediate211 96.68% 3.32%
Temperate Japonica335 24.48% 75.52%
Tropical Japonica94 37.23% 62.77%
Japonica Intermediate68 47.06% 52.94%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 71.43% 28.57%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf1210568913 T->C INTERGENIC None