Detailed information of SNP:
|
SNP ID:
sf1214089047(Gbrowse)
Chromosome: chr12 Position: 14089047 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1379 | 97.24% | 2.76% |
| All Indica | 791 | 98.61% | 1.39% |
| All Japonica | 466 | 94.21% | 5.79% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 375 | 100.00% | 0.00% |
| Indica II | 212 | 95.75% | 4.25% |
| Indica Intermediate | 204 | 99.02% | 0.98% |
| Temperate Japonica | 309 | 92.88% | 7.12% |
| Tropical Japonica | 93 | 94.62% | 5.38% |
| Japonica Intermediate | 64 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 100.00% | 0.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf1214089047 | G->A | INTERGENIC | None |