Detailed information of SNP:
|
SNP ID:
sf1214512855(Gbrowse)
Chromosome: chr12 Position: 14512855 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1393 | 83.42% | 16.58% |
| All Indica | 774 | 71.71% | 28.29% |
| All Japonica | 497 | 99.40% | 0.60% |
| Aus | 67 | 95.52% | 4.48% |
| Indica I | 366 | 75.41% | 24.59% |
| Indica II | 207 | 71.50% | 28.50% |
| Indica Intermediate | 201 | 65.17% | 34.83% |
| Temperate Japonica | 335 | 99.10% | 0.90% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 92.86% | 7.14% |
| Intermediate | 41 | 87.80% | 12.20% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf1214512855 | G->A | INTERGENIC | None |