Detailed information of SNP:



SNP ID: sf1214575762(Gbrowse)

Chromosome: chr12

Position: 14575762
Major allele: C

Minor allele: T

Reference allele: C

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of T(minor allele)
All1375 66.98% 33.02%
All Indica768 60.94% 39.06%
All Japonica486 84.36% 15.64%
Aus65 29.23% 70.77%
Indica I361 78.39% 21.61%
Indica II201 34.33% 65.67%
Indica Intermediate206 56.31% 43.69%
Temperate Japonica331 92.45% 7.55%
Tropical Japonica91 65.93% 34.07%
Japonica Intermediate64 68.75% 31.25%
Group VI/Aromatic14 7.14% 92.86%
Intermediate42 54.76% 45.24%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf1214575762 C->T INTERGENIC None