Detailed information of SNP:
|
SNP ID:
sf1214654181(Gbrowse)
Chromosome: chr12 Position: 14654181 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1412 | 78.54% | 21.46% |
| All Indica | 792 | 71.84% | 28.16% |
| All Japonica | 497 | 87.93% | 12.07% |
| Aus | 67 | 80.60% | 19.40% |
| Indica I | 371 | 58.49% | 41.51% |
| Indica II | 211 | 88.15% | 11.85% |
| Indica Intermediate | 210 | 79.05% | 20.95% |
| Temperate Japonica | 335 | 95.82% | 4.18% |
| Tropical Japonica | 94 | 60.64% | 39.36% |
| Japonica Intermediate | 68 | 86.76% | 13.24% |
| Group VI/Aromatic | 14 | 92.86% | 7.14% |
| Intermediate | 42 | 85.71% | 14.29% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf1214654181 | G->A | INTERGENIC | None |