Detailed information of SNP:



SNP ID: sf1216754912(Gbrowse)

Chromosome: chr12

Position: 16754912
Major allele: G

Minor allele: A

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1392 97.13% 2.87%
All Indica775 95.74% 4.26%
All Japonica496 99.19% 0.81%
Aus65 98.46% 1.54%
Indica I365 94.52% 5.48%
Indica II207 96.14% 3.86%
Indica Intermediate203 97.54% 2.46%
Temperate Japonica335 99.70% 0.30%
Tropical Japonica93 96.77% 3.23%
Japonica Intermediate68 100.00% 0.00%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 95.24% 4.76%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf1216754912 G->A INTERGENIC None