Detailed information of SNP:



SNP ID: sf1217719637(Gbrowse)

Chromosome: chr12

Position: 17719637
Major allele: A

Minor allele: G

Reference allele: A

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of A(major allele)Frequency of G(minor allele)
All1405 84.13% 15.87%
All Indica786 75.57% 24.43%
All Japonica497 94.97% 5.03%
Aus67 100.00% 0.00%
Indica I375 97.33% 2.67%
Indica II203 35.47% 64.53%
Indica Intermediate208 75.48% 24.52%
Temperate Japonica335 99.70% 0.30%
Tropical Japonica94 76.60% 23.40%
Japonica Intermediate68 97.06% 2.94%
Group VI/Aromatic14 100.00% 0.00%
Intermediate41 85.37% 14.63%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf1217719637 A->G INTERGENIC None