Detailed information of SNP:



SNP ID: sf1217995856(Gbrowse)

Chromosome: chr12

Position: 17995856
Major allele: A

Minor allele: G

Reference allele: A

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of A(major allele)Frequency of G(minor allele)
All1419 85.41% 14.59%
All Indica799 82.98% 17.02%
All Japonica497 99.40% 0.60%
Aus67 13.43% 86.57%
Indica I375 78.93% 21.07%
Indica II213 85.92% 14.08%
Indica Intermediate211 87.20% 12.80%
Temperate Japonica335 100.00% 0.00%
Tropical Japonica94 97.87% 2.13%
Japonica Intermediate68 98.53% 1.47%
Group VI/Aromatic14 71.43% 28.57%
Intermediate42 85.71% 14.29%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf1217995856 A->G INTERGENIC None