Detailed information of SNP:
|
SNP ID:
sf1218511692(Gbrowse)
Chromosome: chr12 Position: 18511692 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1389 | 95.32% | 4.68% |
| All Indica | 770 | 91.95% | 8.05% |
| All Japonica | 497 | 100.00% | 0.00% |
| Aus | 67 | 98.51% | 1.49% |
| Indica I | 358 | 94.69% | 5.31% |
| Indica II | 209 | 89.95% | 10.05% |
| Indica Intermediate | 203 | 89.16% | 10.84% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 95.12% | 4.88% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf1218511692 | G->A | INTERGENIC | None |