Detailed information of SNP:



SNP ID: sf1221164603(Gbrowse)

Chromosome: chr12

Position: 21164603
Major allele: G

Minor allele: A

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1419 98.38% 1.62%
All Indica799 97.25% 2.75%
All Japonica497 100.00% 0.00%
Aus67 100.00% 0.00%
Indica I375 96.80% 3.20%
Indica II213 98.12% 1.88%
Indica Intermediate211 97.16% 2.84%
Temperate Japonica335 100.00% 0.00%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 100.00% 0.00%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 97.62% 2.38%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf1221164603 G->A INTERGENIC None