Detailed information of SNP:



SNP ID: sf1221448935(Gbrowse)

Chromosome: chr12

Position: 21448935
Major allele: A

Minor allele: C

Reference allele: A

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of A(major allele)Frequency of C(minor allele)
All1414 95.83% 4.17%
All Indica798 99.75% 0.25%
All Japonica493 89.66% 10.34%
Aus67 100.00% 0.00%
Indica I375 100.00% 0.00%
Indica II212 99.53% 0.47%
Indica Intermediate211 99.53% 0.47%
Temperate Japonica333 89.79% 10.21%
Tropical Japonica93 87.10% 12.90%
Japonica Intermediate67 92.54% 7.46%
Group VI/Aromatic14 92.86% 7.14%
Intermediate42 88.10% 11.90%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf1221448935 A->C INTERGENIC None