Detailed information of SNP:
SNP ID:
sf1221898085(Gbrowse)
Chromosome: chr12 Position: 21898085 |
Major allele:
A
Minor allele: G Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
Populations | Population Size | Frequency of A(major allele) | Frequency of G(minor allele) |
---|---|---|---|
All | 1410 | 61.70% | 38.30% |
All Indica | 790 | 33.04% | 66.96% |
All Japonica | 497 | 100.00% | 0.00% |
Aus | 67 | 97.01% | 2.99% |
Indica I | 368 | 8.97% | 91.03% |
Indica II | 212 | 76.89% | 23.11% |
Indica Intermediate | 210 | 30.95% | 69.05% |
Temperate Japonica | 335 | 100.00% | 0.00% |
Tropical Japonica | 94 | 100.00% | 0.00% |
Japonica Intermediate | 68 | 100.00% | 0.00% |
Group VI/Aromatic | 14 | 100.00% | 0.00% |
Intermediate | 42 | 78.57% | 21.43% |
Allele Var Effect:
SNP ID | Var | Gene | Effect/Location |
---|---|---|---|
sf1221898085 | A->G | INTERGENIC | None |