Detailed information of SNP:



SNP ID: sf1223836153(Gbrowse)

Chromosome: chr12

Position: 23836153
Major allele: G

Minor allele: A

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1419 97.67% 2.33%
All Indica799 100.00% 0.00%
All Japonica497 93.56% 6.44%
Aus67 100.00% 0.00%
Indica I375 100.00% 0.00%
Indica II213 100.00% 0.00%
Indica Intermediate211 100.00% 0.00%
Temperate Japonica335 96.12% 3.88%
Tropical Japonica94 94.68% 5.32%
Japonica Intermediate68 79.41% 20.59%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 97.62% 2.38%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf1223836153 G->A INTERGENIC None