Detailed information of SNP:



SNP ID: sf1224300694(Gbrowse)

Chromosome: chr12

Position: 24300694
Major allele: C

Minor allele: T

Reference allele: C

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of T(minor allele)
All1402 98.57% 1.43%
All Indica799 99.75% 0.25%
All Japonica480 96.25% 3.75%
Aus67 100.00% 0.00%
Indica I375 100.00% 0.00%
Indica II213 99.53% 0.47%
Indica Intermediate211 99.53% 0.47%
Temperate Japonica328 100.00% 0.00%
Tropical Japonica86 79.07% 20.93%
Japonica Intermediate66 100.00% 0.00%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 100.00% 0.00%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf1224300694 C->T INTERGENIC None