Detailed information of SNP:



SNP ID: sf1225450884(Gbrowse)

Chromosome: chr12

Position: 25450884
Major allele: G

Minor allele: A

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1419 97.18% 2.82%
All Indica799 94.99% 5.01%
All Japonica497 100.00% 0.00%
Aus67 100.00% 0.00%
Indica I375 90.67% 9.33%
Indica II213 99.53% 0.47%
Indica Intermediate211 98.10% 1.90%
Temperate Japonica335 100.00% 0.00%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 100.00% 0.00%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 100.00% 0.00%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf1225450884 G->A INTERGENIC None